Acta Pharmacol Sin. co-auth.: W. Wahli

PPARβ/δ contributes to the antidiabetic effect and the increase in GDF15 caused by metformin

Javier Jurado-Aguilar  1   2   3   4 Emma Barroso  1   2   3   4 Patricia Rada  3   5 Mona Peyman  1   2   3   4 Adel Rostami  1   2   3   4 Jesús Balsinde  3   6 Ángela M Valverde  3   5 Walter Wahli  7   8 Xavier Palomer  1   2   3   4 Manuel Vázquez-Carrera  9   10   11   12

Affiliations

Commun Biol, Group Michalik

The dynamics of mutational selection in cutaneous squamous carcinogenesis

Greta Skrupskelyte  1 Joanna C Fowler  2 Stefan Dentro  2   3   4 Carine Winkler  5 Irina Abnizova  2 Niklaus Beumer  3   6   7 Roshan Sood  2 Thomas Quarrell  8 Charlotte King  2 Jivko Kamarashev  9 Emmanuella Guenova  10   11 Moritz Gerstung  3   4 Benjamin A Hall  12 Liliane Michalik  5 Philip H Jones  13   14

Abstract

Identifying the mutant genes that are selected during carcinogenesis is key to identifying candidates for intervention and understanding the processes that promote transformation. Here we applied two selection metrics to study the dynamics of mutational selection in a mouse model of ultraviolet light driven skin carcinogenesis in which multiple synchronous tumors develop in each animal. Sequencing normal skin and tumors over a time course revealed two genetic routes to squamous carcinoma. Nonsynonymous Trp53 mutants were positively selected in both epidermis and tumors and present in 90% of tumors. The remaining tumors carried other oncogenic mutants, including activating Kras mutations. However, other positively selected mutant genes lost their competitive advantage in heavily mutated epidermis and in tumors. We found ten mutant genes under negative selection in normal skin, one of which was also negatively selected in tumors. In addition one gene was negatively selected in tumors but not normal skin. We conclude that analysing selection in normal tissue alongside tumors may resolve the dynamics of selection in carcinogenesis and refine the identification of cancer drivers.

Curr Biol; R. Benton

Olfactory receptors: Making sense (and antisense) of monogenic expression

Richard Benton  1

Abstract

Monogenic expression of odorant receptors (ORs) in individual sensory neurons is a hallmark of olfactory systems in insects and vertebrates. New studies highlight how transcriptional interference and antisense transcription might ensure such selectivity in large OR arrays of social insects.

Biochem Biophys Rep,: A. Reymond

Single nucleotide variants in UNC13C associated with neurodevelopmental disorders affect ethanol sensitivity in Drosophila

Franz Müller  1 Sonja Neuser  2 Gaurav Shrestha  3 Netra P Neupane  4 Katharina J Götze  1 Nicola Brunetti-Pierri  5   6   7 Gaetano Terrone  5 Alexandre Reymond  8 Koen L van Gassen  9 Eva Brilstra  9 Katharina Steindl  10 Anais Begemann  10 Anita Rauch  10 Jonathan Rips  11 Duha Fahham  11 Tahsin Stefan Barakat  12 Olivier Patat  13 Jérémie Mortreux  14 Matthew Hoi Kin Chau  15   16   17 Jill A Rosenfeld  18 Elizabeth Mizerik  18   19 Swati Srivastava  18   20 Xi Luo  18   20 Anne-Kristin Dahse  1 Nicole Scholz  1 Joydip Das  4 Gregg Roman  21 Tobias Langenhan  1   22   23 Rami Abou Jamra  2 Achmed Mrestani  1   24 Dmitrij Ljaschenko  1

Affiliations

Abstract

UNC13s are presynaptic proteins essential for neurotransmitter release at chemical synapses. In this study, we present eleven patients from nine families with severe neurodevelopmental impairments, who carry rare, biallelic UNC13C single-nucleotide variants (SNVs). Six missense variants, each identified in compound heterozygosity in one of three of these patients, were introduced into the Drosophila melanogaster ortholog unc13 using a previously established CRISPR/Cas9-based method for rapid and scarless genomic modifications, hypothesising that they underlie the observed clinical manifestations. However, none of the introduced mutations influenced Mendelian ratios, negative geotaxis, or lifespan of the fruit flies. Interestingly, two variants located outside the gene regions encoding known UNC13C domains caused a decreased ethanol sensitivity in Drosophila, while the Thr1729Met substitution within the C1 domain resulted in increased ethanol sensitivity. Molecular dynamics simulations of the latter mutant gene product suggested that the altered protein conformation enhances exposure of the ethanol-binding site, thereby increasing sensitivity to ethanol. These findings reinforce previous evidence highlighting the critical role of the C1 domain in ethanol sensitivity. Given the involvement of the C1 domain in synaptic plasticity this result might implicate an influence of the Thr1729Met on synaptic function.

Keywords: Chemical synapse; Dunc13; Ethanol sensitivity; Molecular dynamics simulation; Neurodevelopmental disease; UNC13C; Unc13.

Welcome to Juliette Merrheim !

Hi everyone! I’m Juliette, a new PhD student in the Larsch group. 

I recently completed my master’s degree in neuroscience in Paris. If my face seems familiar to you, it’s because I did my master’s internship half a year ago in the same group. I was working on neural activity variability between zebrafish in a social context. Can we find an area, a circuit, a population of neurons that is more active when fish are more social? That was my main interest. I didn’t find the answer, so here I am, starting my PhD with the same question in mind. I’m grateful to have the opportunity to keep working on a subject that I love with an amazing research model and team.

I’m excited to get to know all of you! See you around wine and cheese. (beer and pizza work as well)