Recent publications
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Plant J.; auth group Fankhauser, co-auth GTF VitalIT

Plant J. 2012 Apr 26. doi: 10.1111/j.1365-313X.2012.05033.x. [Epub ahead of print]

Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling.

Source

Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland. Bioinformatics and Biostatistics Core Facility, School of Life Sciences, and Swiss Institute of Bioinformatics, EPFL, CH-1015 Lausanne, Switzerland. Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden. Departamento de Genética Molecular de Plantas, Centro Nacional de Biotecnología-Consejo Superior de Investigaciones Científicas, Campus Universidad Autónoma, 28049 Madrid, Spain. Vital-IT, Swiss Institute of Bioinformatics, Bâtiment Génopode, 1015 Lausanne, Switzerland. Genomic Technologies Facility, Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland.

Abstract

Plant growth is strongly influenced by the presence of neighbors competing for light resources. In response to vegetational shading shade-intolerant plants such as Arabidopsis display a suite of developmental responses known as the shade avoidance syndrome (SAS). The phytochrome B (phyB) photoreceptor is the major light sensor mediating this adaptive response. The control of the SAS occurs in part with phyB directly controlling protein abundance of Phytochrome Interacting Factors 4 and 5 (PIF4 and PIF5). The shade avoidance response also requires rapid biosynthesis of auxin and its transport to promote elongation growth. The identification of genome-wide PIF5 binding sites during shade avoidance reveals that this bHLH transcription factor regulates the expression of a subset of previously identified SAS genes. Moreover our study suggests that PIF4 and PIF5 regulate elongation growth by directly controlling the expression of genes coding for auxin biosynthesis and auxin signaling components. © 2012 The Authors. The Plant Journal © 2012 Blackwell Publishing Ltd.

© 2012 The Authors. The Plant Journal © 2012 Blackwell Publishing Ltd.

PMID: 22536829
[PubMed - as supplied by publisher]
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May 14, 2012: SIB statistics workshop “Graphical presentation of statistical data in life sciences”

Dear all,

We are pleased to announce a SIB statistics workshop entitled:

Graphical presentation of statistical data in life sciences

This one day workshop, which will be held in Lausanne on Monday 14 May 2012, will discuss different ways for representing statistical data in life sciences, how to design efficient graphs, good practices for plotting data, and common mistakes to avoid.

Further information as well as the registration page are available from

http://edu.isb-sib.ch/course/view.php?id=119

The number of seats is limited.

Hope to see you there !

For the organizers,

Frédéric Schütz

______________________________________________

courses mailing list: courses@lists.isb-sib.ch
http://lists.isb-sib.ch/mailman/listinfo/courses

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Philippe Julien public thesis – Friday May 4th, 2012

Soutenance de thèse

Monsieur Philippe JULIEN

“Evolution des niveaux d’expression des ARN messagers des gènes autosomaux et liés au sexe chez les amiotes”

Directeur de thèse : Professeur Henrik Kaessmann

Cette soutenance aura lieu le vendredi 4 mai 2012 à 16h00

Auditoire A, Génopode